Příklad matice, ze které pravděpodobnostní identifikační systém čerpá podklady pro výpočet. Matice byla sestavena z různých publikovaných dílčích tabulek a odpovídá diagnostické soupravě Enterotest 16. Čísla značí procentuální pravděpodobnost výskytu znaku uvedeného v záhlaví sloupce.
Některé identifikační systémy (Gideon) používají ještě matici s dlouhodobě zjišťovanou četností jednotlivých druhů v infekčním materiálu a tuto četnost zohledňují.
|
Bacterial species |
ONP |
H2S |
LYS |
IND |
ORN |
URE |
FEN |
SCI |
MAL |
INO |
ADO |
CEL |
SUC |
SOR |
TRE |
MAN |
|
Acinetobacter calcoaceticus |
1 |
1 |
1 |
1 |
1 |
42 |
1 |
84 |
50 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
|
Aeromonas hydrophila |
100 |
0 |
10 |
96 |
0 |
2 |
0 |
80 |
0 |
2 |
0 |
42 |
80 |
20 |
100 |
98 |
|
Aeromonas salmonicida |
1 |
1 |
83 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
8 |
99 |
|
Budvicia aquatica |
99 |
99 |
1 |
1 |
1 |
99 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
|
Buttiauxella agrestis |
99 |
1 |
10 |
1 |
99 |
1 |
1 |
50 |
90 |
1 |
1 |
99 |
1 |
10 |
99 |
99 |
|
Cedecea davisae |
99 |
1 |
1 |
1 |
99 |
1 |
1 |
1 |
99 |
1 |
1 |
99 |
99 |
1 |
99 |
99 |
|
Cedecea lapageri |
99 |
1 |
1 |
1 |
1 |
1 |
1 |
99 |
99 |
1 |
1 |
99 |
1 |
1 |
99 |
99 |
|
Cedecea neteri |
99 |
1 |
1 |
1 |
1 |
1 |
1 |
99 |
99 |
1 |
1 |
99 |
99 |
99 |
99 |
99 |
|
Cedecea species 3 |
99 |
1 |
1 |
1 |
1 |
1 |
1 |
99 |
99 |
1 |
1 |
99 |
99 |
67 |
99 |
99 |
|
Cedecea species 5 |
99 |
1 |
1 |
1 |
99 |
1 |
1 |
1 |
1 |
1 |
1 |
99 |
99 |
99 |
99 |
99 |
|
Citrobacter amalonaticus |
99 |
1 |
1 |
99 |
99 |
70 |
1 |
99 |
1 |
1 |
1 |
99 |
9 |
99 |
99 |
99 |
|
Citrobacter diversus |
100 |
0 |
0 |
100 |
98 |
85 |
0 |
98 |
94 |
0 |
100 |
98 |
21 |
98 |
100 |
100 |
|
Citrobacter freundii |
90 |
79 |
2 |
12 |
22 |
61 |
0 |
90 |
21 |
2 |
0 |
55 |
30 |
98 |
100 |
98 |
|
Citrobacter koseri |
99 |
1 |
1 |
94 |
68 |
75 |
1 |
96 |
94 |
4 |
99 |
99 |
48 |
99 |
99 |
99 |
|
Edwardsiella hoshinae |
1 |
1 |
99 |
75 |
99 |
1 |
1 |
1 |
63 |
1 |
1 |
1 |
99 |
1 |
99 |
99 |
|
Edwardsiella ictaluri |
1 |
1 |
99 |
1 |
99 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
|
Edwardsiella tarda |
0 |
98 |
100 |
98 |
98 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
|
Edwardsiella tarda biogroup 1 |
1 |
1 |
99 |
99 |
99 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
99 |
1 |
1 |
99 |
|
Enterobacter aerogenes |
100 |
0 |
95 |
2 |
95 |
5 |
0 |
93 |
75 |
97 |
97 |
100 |
100 |
98 |
100 |
100 |
|
Pantoea agglomerans |
90 |
0 |
0 |
10 |
0 |
21 |
16 |
67 |
62 |
14 |
8 |
54 |
77 |
24 |
100 |
100 |
|
Enterobacter amnigenus |
99 |
1 |
1 |
1 |
99 |
1 |
1 |
80 |
99 |
1 |
1 |
99 |
50 |
50 |
99 |
99 |
|
Enterobacter asburiae |
99 |
1 |
1 |
1 |
99 |
80 |
1 |
99 |
1 |
1 |
1 |
99 |
99 |
99 |
99 |
99 |
|
Enterobacter cloacae |
100 |
0 |
0 |
2 |
98 |
75 |
0 |
98 |
82 |
13 |
22 |
98 |
94 |
90 |
100 |
100 |
|
Enterobacter gergoviae |
99 |
1 |
19 |
1 |
99 |
99 |
1 |
99 |
99 |
1 |
1 |
99 |
99 |
1 |
99 |
99 |
|
Enterobacter intermedium |
99 |
1 |
1 |
1 |
91 |
1 |
1 |
99 |
99 |
1 |
1 |
99 |
91 |
99 |
99 |
99 |
|
Enterobacter sakazakii |
99 |
1 |
1 |
1 |
85 |
1 |
1 |
99 |
25 |
80 |
1 |
99 |
99 |
1 |
99 |
99 |
|
Enterobacter cancerogenes |
99 |
1 |
1 |
1 |
99 |
1 |
1 |
99 |
99 |
1 |
1 |
99 |
1 |
1 |
99 |
99 |
|
Escherichia blattae |
1 |
1 |
99 |
1 |
99 |
1 |
1 |
50 |
99 |
1 |
1 |
1 |
1 |
1 |
99 |
1 |
|
Escherichia coli |
100 |
2 |
81 |
98 |
58 |
2 |
0 |
0 |
0 |
0 |
5 |
2 |
54 |
80 |
98 |
98 |
|
Escherichia fergusonii |
99 |
1 |
1 |
1 |
99 |
1 |
1 |
99 |
99 |
1 |
1 |
99 |
1 |
1 |
99 |
99 |
|
Escherichia hermannii |
99 |
1 |
33 |
99 |
99 |
1 |
1 |
1 |
1 |
1 |
1 |
99 |
33 |
1 |
99 |
99 |
|
Escherichia vulneris |
99 |
1 |
99 |
1 |
1 |
1 |
1 |
1 |
89 |
1 |
1 |
99 |
11 |
1 |
89 |
99 |
|
Hafnia alvei |
90 |
0 |
98 |
2 |
98 |
5 |
0 |
6 |
67 |
0 |
0 |
15 |
7 |
0 |
100 |
100 |
|
Iodobacter fluviatilis |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
33 |
1 |
1 |
1 |
1 |
1 |
1 |
67 |
1 |
|
Chromobacterium violaceum |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
43 |
1 |
1 |
1 |
1 |
14 |
1 |
71 |
1 |
|
Klebsiella ornithinolytica |
99 |
1 |
99 |
99 |
99 |
99 |
1 |
99 |
99 |
99 |
99 |
99 |
99 |
99 |
99 |
99 |
|
Klebsiella oxytoca |
99 |
1 |
92 |
99 |
1 |
94 |
1 |
99 |
95 |
99 |
99 |
99 |
99 |
99 |
99 |
99 |
|
Klebsiella ozaenae |
98 |
0 |
36 |
0 |
4 |
15 |
0 |
28 |
6 |
54 |
92 |
92 |
20 |
30 |
100 |
100 |
|
Klebsiella planticola (Klebsiella trevisanii) |
99 |
1 |
99 |
80 |
1 |
99 |
1 |
99 |
99 |
99 |
99 |
99 |
99 |
99 |
99 |
99 |
|
Klebsiella pneumoniae |
100 |
0 |
97 |
7 |
0 |
95 |
0 |
97 |
92 |
97 |
89 |
98 |
100 |
96 |
100 |
100 |
|
Klebsiella aerogenes |
99 |
1 |
87 |
1 |
2 |
91 |
1 |
87 |
86 |
92 |
92 |
99 |
99 |
96 |
99 |
99 |
|
Klebsiella rhinoscleromatis |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
50 |
90 |
98 |
100 |
75 |
98 |
100 |
100 |
|
Klebsiella terrigena |
99 |
1 |
99 |
1 |
1 |
14 |
1 |
99 |
99 |
99 |
99 |
99 |
99 |
99 |
99 |
99 |
|
Kluyvera spp. |
99 |
1 |
22 |
74 |
96 |
1 |
1 |
87 |
96 |
1 |
1 |
99 |
99 |
30 |
99 |
99 |
|
Koserella trabulsii (Yokenella regensbergei) |
99 |
1 |
99 |
1 |
99 |
1 |
1 |
99 |
20 |
1 |
1 |
99 |
1 |
1 |
99 |
99 |
|
Leclercia adecarboxylata (Escherichia adecarboxylata) |
99 |
1 |
1 |
99 |
1 |
10 |
1 |
1 |
99 |
1 |
99 |
99 |
70 |
1 |
99 |
99 |
|
Leminorella grimontii |
1 |
99 |
1 |
1 |
1 |
1 |
1 |
80 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
|
Leminorella richardii |
1 |
99 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
|
Vibrio anguillarum (Listonella a.) |
99 |
1 |
1 |
1 |
1 |
33 |
1 |
99 |
1 |
1 |
1 |
33 |
99 |
99 |
99 |
99 |
|
Moellerella wiscinsensis |
99 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
99 |
1 |
99 |
1 |
1 |
17 |
|
Morganella morganii |
2 |
0 |
2 |
98 |
96 |
89 |
95 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
10 |
0 |
|
Pasteurella aerogenes |
99 |
1 |
1 |
1 |
46 |
99 |
1 |
1 |
1 |
91 |
1 |
1 |
99 |
1 |
1 |
1 |
|
Pasteurella BL group (? P.lymphangitidis) |
1 |
1 |
1 |
1 |
1 |
99 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
99 |
99 |
|
Pasteurella gallinarum |
1 |
1 |
1 |
1 |
99 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
99 |
1 |
99 |
1 |
|
Pasteurella haemolytica A |
61 |
1 |
1 |
1 |
7 |
1 |
1 |
1 |
1 |
39 |
1 |
1 |
99 |
99 |
1 |
99 |
|
Pasteurella haemolytica T |
25 |
1 |
1 |
1 |
25 |
8 |
1 |
1 |
1 |
8 |
1 |
50 |
99 |
67 |
58 |
99 |
|
Pasteurella multocida |
13 |
1 |
2 |
97 |
90 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
99 |
82 |
24 |
92 |
|
Pasteurella multocida-atypical |
1 |
1 |
1 |
99 |
96 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
96 |
1 |
1 |
1 |
|
Pasteurella pneumotropica |
54 |
1 |
1 |
84 |
61 |
49 |
1 |
1 |
1 |
1 |
1 |
1 |
93 |
1 |
84 |
1 |
|
Pasteurella testudinis |
99 |
1 |
1 |
99 |
1 |
1 |
1 |
1 |
1 |
99 |
33 |
1 |
99 |
67 |
33 |
99 |
|
Actinobacillus ureae |
1 |
1 |
1 |
1 |
1 |
68 |
1 |
1 |
1 |
1 |
1 |
1 |
92 |
8 |
1 |
99 |
|
Plesiomonas shigelloides |
90 |
0 |
100 |
98 |
95 |
0 |
0 |
0 |
0 |
95 |
0 |
0 |
0 |
0 |
100 |
2 |
|
Pragia fontium |
1 |
99 |
1 |
1 |
1 |
1 |
1 |
99 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
|
Proteus mirabilis |
0 |
90 |
0 |
10 |
98 |
95 |
100 |
59 |
0 |
0 |
0 |
1 |
19 |
0 |
100 |
2 |
|
Proteus myxofaciens |
1 |
1 |
1 |
1 |
1 |
99 |
99 |
1 |
1 |
1 |
1 |
1 |
99 |
1 |
99 |
1 |
|
Proteus penneri |
1 |
25 |
1 |
1 |
1 |
99 |
99 |
1 |
1 |
1 |
1 |
1 |
99 |
1 |
50 |
1 |
|
Proteus vulgaris |
0 |
95 |
0 |
91 |
0 |
90 |
100 |
11 |
0 |
0 |
0 |
0 |
95 |
0 |
50 |
0 |
|
Providencia alcalifaciens |
2 |
0 |
0 |
98 |
0 |
0 |
97 |
98 |
0 |
2 |
94 |
1 |
13 |
0 |
0 |
2 |
|
Providencia alcalifaciens/rustigi |
1 |
9 |
1 |
91 |
1 |
1 |
98 |
49 |
1 |
2 |
62 |
1 |
80 |
1 |
1 |
1 |
|
Providencia heimbachae |
1 |
1 |
1 |
50 |
1 |
1 |
99 |
1 |
1 |
1 |
83 |
1 |
1 |
1 |
1 |
1 |
|
Providencia pseudomallei |
1 |
1 |
1 |
1 |
1 |
33 |
1 |
99 |
13 |
65 |
12 |
41 |
6 |
47 |
65 |
47 |
|
Providencia rettgeri |
0 |
0 |
0 |
96 |
0 |
90 |
98 |
96 |
0 |
93 |
81 |
3 |
13 |
0 |
0 |
89 |
|
Providencia rustigianii |
1 |
1 |
1 |
94 |
1 |
1 |
95 |
18 |
1 |
1 |
1 |
1 |
72 |
1 |
1 |
1 |
|
Providencia stuartii |
2 |
0 |
0 |
98 |
0 |
6 |
94 |
95 |
0 |
97 |
12 |
5 |
31 |
3 |
100 |
12 |
|
Rahnella aquatilis |
99 |
1 |
1 |
1 |
1 |
1 |
1 |
10 |
99 |
1 |
1 |
99 |
99 |
99 |
99 |
99 |
|
Salmonella arizonae |
98 |
100 |
98 |
5 |
100 |
0 |
0 |
97 |
95 |
0 |
0 |
1 |
3 |
97 |
100 |
100 |
|
Salmonella enteritidis |
2 |
94 |
95 |
2 |
97 |
0 |
0 |
89 |
0 |
38 |
0 |
5 |
0 |
100 |
100 |
100 |
|
Salmonella choleraesuis |
1 |
30 |
99 |
1 |
99 |
1 |
1 |
40 |
1 |
1 |
1 |
1 |
1 |
99 |
1 |
99 |
|
Salmonella paratyphi A |
1 |
8 |
1 |
1 |
99 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
99 |
99 |
99 |
|
Salmonella typhi |
0 |
94 |
100 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
100 |
100 |
98 |
|
Serratia ficaria |
99 |
1 |
1 |
1 |
1 |
1 |
1 |
99 |
1 |
80 |
10 |
99 |
99 |
99 |
99 |
99 |
|
Serratia fonticola |
99 |
1 |
99 |
1 |
99 |
1 |
1 |
99 |
99 |
93 |
99 |
54 |
31 |
99 |
99 |
99 |
|
Serratia liquefaciens |
97 |
1 |
89 |
1 |
99 |
1 |
1 |
99 |
1 |
97 |
1 |
33 |
99 |
99 |
99 |
99 |
|
Serratia marcescens |
90 |
0 |
90 |
2 |
98 |
40 |
0 |
98 |
0 |
77 |
46 |
5 |
100 |
100 |
100 |
100 |
|
Serratia rubidaea |
99 |
1 |
73 |
1 |
1 |
1 |
1 |
99 |
82 |
96 |
99 |
99 |
99 |
1 |
99 |
99 |
|
Serratia odorifera biogroup I |
99 |
1 |
99 |
1 |
99 |
1 |
1 |
99 |
1 |
99 |
75 |
99 |
99 |
99 |
99 |
99 |
|
Serratia odorifera biogroup II |
99 |
1 |
99 |
1 |
1 |
1 |
1 |
99 |
1 |
99 |
99 |
99 |
1 |
99 |
99 |
99 |
|
Serratia plymuthica |
99 |
1 |
1 |
1 |
1 |
1 |
1 |
67 |
1 |
63 |
1 |
84 |
99 |
53 |
99 |
99 |
|
Shigella boydii |
11 |
0 |
0 |
29 |
2 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
42 |
80 |
98 |
|
Shigella dysenteriae |
50 |
0 |
0 |
43 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
29 |
80 |
2 |
|
Shigella flexneri |
0 |
0 |
0 |
62 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
2 |
31 |
80 |
94 |
|
Shigella sonnei |
95 |
0 |
0 |
0 |
98 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
100 |
98 |
|
Shigella spp. (not sonnei) |
13 |
1 |
1 |
41 |
10 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
50 |
99 |
78 |
|
Tatumella ptyseos |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
99 |
1 |
99 |
1 |
|
Vibrio alginolyticus |
1 |
1 |
1 |
1 |
1 |
10 |
1 |
1 |
1 |
1 |
1 |
1 |
99 |
1 |
99 |
99 |
|
Vibrio fluvialis |
99 |
1 |
1 |
1 |
1 |
1 |
1 |
99 |
9 |
1 |
1 |
9 |
99 |
1 |
91 |
99 |
|
Vibrio furnissii |
99 |
1 |
17 |
17 |
17 |
1 |
1 |
99 |
17 |
1 |
1 |
8 |
99 |
1 |
99 |
99 |
|
Vibrio cholerae |
100 |
0 |
98 |
100 |
98 |
0 |
0 |
50 |
0 |
0 |
0 |
0 |
90 |
20 |
0 |
98 |
|
Vibrio metschnikovii |
75 |
1 |
25 |
1 |
1 |
1 |
1 |
63 |
1 |
75 |
1 |
13 |
99 |
25 |
99 |
99 |
|
Vibrio mimicus |
99 |
1 |
99 |
99 |
99 |
1 |
1 |
99 |
1 |
1 |
1 |
1 |
1 |
1 |
99 |
99 |
|
Vibrio parahaemolyticus |
1 |
1 |
93 |
1 |
86 |
21 |
1 |
8 |
1 |
1 |
1 |
7 |
14 |
1 |
99 |
99 |
|
Vibrio vulnificus |
99 |
1 |
83 |
67 |
17 |
1 |
1 |
33 |
1 |
1 |
1 |
99 |
1 |
1 |
99 |
50 |
|
Photorhabdus luminescens |
1 |
1 |
1 |
1 |
1 |
67 |
1 |
33 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
|
Photorhabdus nematophilus |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
33 |
1 |
|
Yersinia enterocolitica |
98 |
0 |
0 |
25 |
98 |
98 |
0 |
2 |
0 |
30 |
0 |
75 |
96 |
98 |
100 |
100 |
|
Yersinia frederiksenii |
99 |
1 |
1 |
99 |
99 |
99 |
1 |
18 |
1 |
55 |
1 |
99 |
99 |
99 |
99 |
99 |
|
Yersinia intermedia |
99 |
1 |
1 |
99 |
99 |
99 |
1 |
70 |
1 |
40 |
1 |
99 |
99 |
99 |
99 |
99 |
|
Yersinia kristensenii |
99 |
1 |
1 |
70 |
99 |
99 |
1 |
1 |
1 |
1 |
1 |
99 |
1 |
99 |
99 |
99 |
|
Yersinia pestis |
99 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
8 |
99 |
99 |
|
Yersinia pseudotuberculosis |
80 |
0 |
0 |
0 |
0 |
100 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
100 |
100 |
|
Yersinia ruckeri |
99 |
1 |
99 |
1 |
99 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
33 |
99 |
99 |
|
FULLNAMES |